Insertion junction: CLIP2.006394_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.006394
Chromosome:chromosome 12
Location:7835518
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre12.g553800 (1 of 1) IPR002110//IPR020683//IPR029071 - Ankyrin repeat // Ankyrin repeat-containing domain // Ubiquitin-related domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGAAGGGAGGGAGAGGGTGCGGGGGTGGGAGTGGAGTGATGAGAAGGG
Internal bar code:AGAGTAGTGTGCAGATGTGATG

Confirmation - LEAP-Seq

LEAP-Seq distance:217
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CGAAGTCGGGTATGTCCAGG
Suggested primer 2:CATTGCACATCCACACCCAC