Insertion junction: CLIP2.006397_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.006397
Chromosome:chromosome 6
Location:6801032
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g296150 (1 of 5) K15255 - ATP-dependent DNA helicase PIF1 [EC:3.6.4.12] (PIF1); PIF1-type helicase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACTGCTGGCCGTTTGGACCTCTTCTATCCTCCCGCACGACACGACAACT
Internal bar code:GACGATAGCATGTGGGCCAAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1640
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCTCCTTCCAGCTCTCCT
Suggested primer 2:GACGTGAGGGACTGGTGAAG