Insertion junction: CLIP2.006399_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.006399
Chromosome:chromosome 9
Location:4553915
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre09.g401182 CGL153 predicted protein; (1 of 1) K14575 - AAA family ATPase (AFG2, DRG1, SPATA5) outside_mRNA
Cre09.g401219 (1 of 1) IPR000210//IPR011041//IPR011333 - BTB/POZ domain // Soluble quinoprotein glucose/sorbosone dehydrogenase // POZ domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACATGCTCGTGTGCCGGTGATGTTACTGTTGTCACTCAGCCCCTGCCGCC
Internal bar code:GCTAGTTCTTTTATTAAGTATC

Confirmation - LEAP-Seq

LEAP-Seq distance:585
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGTGGCCTGTCATTCTCT
Suggested primer 2:TTGATGCAATGCGCGATGAG