Insertion junction: CLIP2.006399_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.006399
Chromosome:chromosome 12
Location:9335032
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre12.g541904 (1 of 1) PF08755//PF13369 - Hemimethylated DNA-binding protein YccV like (YccV-like) // Transglutaminase-like superfamily (Transglut_core2) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGCCGCGACCCGCCCCGAGCCCGGAGCAGCACGTGCCTCGGGCCGCCAT
Internal bar code:AAAATGTGGAGGGTCGACTAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:591
LEAP-Seq percent confirming:36.3636
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:GACACCAGCACACGGTAGAA
Suggested primer 2:ATTGTGTGGGGTGTGTGTGT