Insertion junction: CLIP2.006401_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.006401
Chromosome:chromosome 12
Location:3369882
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g498150 (1 of 2) PTHR22847//PTHR22847:SF431 - WD40 REPEAT PROTEIN // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAACCTTGACGGCAGACGGCTGTGGCGTGCGGCTGCCCGTGCTTGCAGCC
Internal bar code:AGGGAGACTTAGATTATCCATT

Confirmation - LEAP-Seq

LEAP-Seq distance:1439
LEAP-Seq percent confirming:93.3333
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:AGTGGGCGTGTAAAGGAGTG
Suggested primer 2:GTAGCATCGATGTGGGAGGG