Insertion junction: CLIP2.006401_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.006401
Chromosome:chromosome 16
Location:1932171
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g656100 (1 of 1) PF07444 - Ycf66 protein N-terminus (Ycf66_N) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGGCGCATCTGCCCGCTTCGTGGGCAACGGTGCCGAGATCTGCTGATG
Internal bar code:CCTTTTCACTTAAAGAGTTGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1116
LEAP-Seq percent confirming:63.1579
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:CAGGATGGGGTTGCCGTAAT
Suggested primer 2:TTCGCTAGTCCCTCTCTGCT