Insertion junction: CLIP2.006403_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.006403
Chromosome:chromosome 16
Location:4603452
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g670950 CYC4 c-type cytochrome, chloroplast precursor; (1 of 1) PTHR34688//PTHR34688:SF1 - FAMILY NOT NAMED // CYTOCHROME C6, CHLOROPLASTIC intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGTGGGCAAAGGCAGTCCACAAGCAACCGAAGGTGTGTCGGCGTGGGTG
Internal bar code:GAGGAAAATAGTTAGCTGGCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1839
LEAP-Seq percent confirming:93.3333
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:GAGTATACAGGGGTCGCTGC
Suggested primer 2:TCACCTCCTCATCGCTCAGA