Insertion junction: CLIP2.006406_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.006406
Chromosome:chromosome 12
Location:3626150
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g513300 CGL23 Conserved in the Green Lineage intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTCAACTTTGCGCGTTTCTGGCCCCGTAGTCGCTCGAGGACTGCGTAAC
Internal bar code:TGCCTGGCGATCTGATGGAAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1375
LEAP-Seq percent confirming:49.1803
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:31
LEAP-Seq n unique pos:61

Suggested primers for confirmation by PCR

Suggested primer 1:ACCGCCTGACCTAATTTGCA
Suggested primer 2:GAGGTACATAGTCCTGGCGC