Insertion junction: CLIP2.006409_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.006409
Chromosome:chromosome 8
Location:3166348
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g376450 CPLD36 Conserved in the Plant Lineage and Diatoms; (1 of 1) PF12159 - Protein of unknown function (DUF3593) (DUF3593) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCTGTCACAGCGTCTCCCTTCGCCAGGTCACCTGGTCCAAACATGGCGC
Internal bar code:CATGGGTCTTATGTGAGGTATA

Confirmation - LEAP-Seq

LEAP-Seq distance:140
LEAP-Seq percent confirming:44.4444
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GCTCAGGATCGAAGTCGGAG
Suggested primer 2:ACCGCACATATCGATGGCAT