Insertion junction: CLIP2.006409_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.006409
Chromosome:chromosome 8
Location:3166348
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g376450 CPLD36 Conserved in the Plant Lineage and Diatoms; (1 of 1) PF12159 - Protein of unknown function (DUF3593) (DUF3593) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTCCGGGTCGGCTGCCGTTGCAGTTTCAAAGGAGCAGGCATAGGGGTTG
Internal bar code:CATGGGTCTTATGTGAGGTATA

Confirmation - LEAP-Seq

LEAP-Seq distance:3313
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:ACCGCACATATCGATGGCAT
Suggested primer 2:GCTCAGGATCGAAGTCGGAG