Insertion junction: CLIP2.006411_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.006411
Chromosome:chromosome 3
Location:6745451
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre03.g196350 (1 of 3) K09858 - SEC-C motif domain protein (K09858) 3'UTR
Cre03.g196400 EPC1 (1 of 1) K11322 - enhancer of polycomb-like protein (EPC) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTTGCATCTTCGGGGAGCGGCAAGAAACAGGCCCCGATGCAGGCCCTCG
Internal bar code:AGGATGAGTTGAGACAATTTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:597
LEAP-Seq percent confirming:3.44828
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:28
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:AAGGGAGGTGTAACGGCATG
Suggested primer 2:ACGTATAGTGGCAGACCCCT