Insertion junction: CLIP2.006415_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.006415
Chromosome:chromosome 12
Location:425811
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre12.g495100 PSR1 (1 of 1) PF00249//PF14379 - Myb-like DNA-binding domain (Myb_DNA-binding) // MYB-CC type transfactor, LHEQLE motif (Myb_CC_LHEQLE); Phosphorus starvation response 1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTGTCGCAGCATCAAGACGCAGCACAGCTGCCTGAGGCCATGCCGCAG
Internal bar code:AACACGGGTGTTTCCGCCTCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:277
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGTGTGATGTGGACAGGA
Suggested primer 2:GTGCGGTGAAAGTGAAACCC