Insertion junction: CLIP2.006416_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.006416
Chromosome:chromosome 1
Location:6337272
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g044850 (1 of 1) K17592 - sacsin (SACS) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACTTGAACCATTGCAGGTCACAGGCGCGGCAATCCATCGAAAGCAGAAC
Internal bar code:CTTAAGAATTACGTAACGGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:902
LEAP-Seq percent confirming:70.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:AGTCGTGACGTCTGGAGGTA
Suggested primer 2:GAGGTGTGTGGAGGTGTGAG