Insertion junction: CLIP2.006422_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.006422
Chromosome:chromosome 2
Location:8014154
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g144850 CGLD26b,CGLD26 Conserved in the Green Lineage and Diatoms CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCACACTATCTGAGGCAGCCTGTAGGACAGATGCCGTGTCAGCGCAGGC
Internal bar code:TGCTTAGTGTGTTGTTGGGGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1912
LEAP-Seq percent confirming:95.8333
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:GAGAAGGAAGCCGAAGCAGT
Suggested primer 2:CCCCTGCTCATTCACCCAAT