Insertion junction: CLIP2.006435_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.006435
Chromosome:chromosome 6
Location:2021502
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre06.g265550 CDPK12 (1 of 1) PF07714//PF13202 - Protein tyrosine kinase (Pkinase_Tyr) // EF hand (EF-hand_5); Calcium/calmodulin-dependent protein kinase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACAAACCACGAAAGGCAAACCGGCCCACATCTCTCACCGCGCACCCACC
Internal bar code:AGTTGATCGCTTGTAGGATCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:234
LEAP-Seq percent confirming:93.3333
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:AAATGAACGCAGCCAACACC
Suggested primer 2:GTGGTGGTAGGTGATGGTGG