Insertion junction: CLIP2.006436_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.006436
Chromosome:chromosome 3
Location:3156784
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g164900 (1 of 1) PTHR24361//PTHR24361:SF159 - MITOGEN-ACTIVATED KINASE KINASE KINASE // SERINE/THREONINE-PROTEIN KINASE OSR1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTATTCCCGCCGCCCCAAAACGACGGTCTCCTCCATCCCGCCACCCCTC
Internal bar code:GGACTTTTTTAAAACGCCAGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1585
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:GTGGGGCGGTTGTTGTTTAC
Suggested primer 2:AATGGCGGATTCGTGGAACT