Insertion junction: CLIP2.006437_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.006437
Chromosome:chromosome 12
Location:2946441
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g502250 PLP4,PLAP4 Plastid lipid associated protein 4; (1 of 17) PF04755 - PAP_fibrillin (PAP_fibrillin) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACTTGCCCACACCCGCACCGGTAAACTCGCTGACCCACACCTTGTTGGT
Internal bar code:TTCAACTCTGCGGCAGCAAGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1760
LEAP-Seq percent confirming:28.5714
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:TGGGGAAGTATGGGGAGGAG
Suggested primer 2:CAGGAACAGCTTGTCGGCTA