Insertion junction: CLIP2.006451_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.006451
Chromosome:chromosome 4
Location:2141630
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g219851 (1 of 2) PF11360 - Protein of unknown function (DUF3110) (DUF3110) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGCAGCGGGCCTATCGGGCCGCTTGGCGGTGACTTTACGGACGAGGTA
Internal bar code:TACTTGAGAGGGTACTAAGATA

Confirmation - LEAP-Seq

LEAP-Seq distance:1258
LEAP-Seq percent confirming:81.25
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCCTGACTGACTGACCTG
Suggested primer 2:TTTGGTGACCTCAGACGAGC