Insertion junction: CLIP2.006472_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.006472
Chromosome:chromosome 6
Location:4830391
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g280150 PSBP9 PsbP-like protein of thylakoid lumen; (1 of 3) PTHR31407//PTHR31407:SF18 - FAMILY NOT NAMED // PSBP DOMAIN-CONTAINING PROTEIN 4, CHLOROPLASTIC 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGGAGTGCAGAGGCACGCGCCGTCACGCACAACCGGCGCCCTCACAGTA
Internal bar code:CTTCCAAGAAATGCTGCAGACG

Confirmation - LEAP-Seq

LEAP-Seq distance:669
LEAP-Seq percent confirming:29.6296
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:AAGCTGGGGTCTATTGGTGC
Suggested primer 2:CACAACAACAGCCAGTCAGC