Insertion junction: CLIP2.006478_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.006478
Chromosome:chromosome 10
Location:1362115
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g427800 (1 of 3) IPR002889//IPR013994 - Carbohydrate-binding WSC // Carbohydrate-binding WSC, subgroup CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTGGCTGCTGCAAGCTTCTCCGGGCGCCTCTGAGTTTGAGCGCAGCCTC
Internal bar code:GGTCTTATCTCTTAAAGTAATG

Confirmation - LEAP-Seq

LEAP-Seq distance:5045
LEAP-Seq percent confirming:89.0909
LEAP-Seq n confirming:49
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:55

Suggested primers for confirmation by PCR

Suggested primer 1:TTCGCCTGAGGAAAGCATGT
Suggested primer 2:ACGTGCCCGAGTCGAATATC