Insertion junction: CLIP2.006490_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.006490
Chromosome:chromosome 3
Location:6294002
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre03.g191950 CGLD31 (1 of 1) PF01782 - RimM N-terminal domain (RimM); RimM-like protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCGCTTTTAGCCTCTTCAATCCATTCCCATGACGGATCTACACGCCAC
Internal bar code:TTAGACGTAGCACTTTCGAGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:795
LEAP-Seq percent confirming:30.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:TCGAACGCTGTGACATGACA
Suggested primer 2:CCAGCAGCTCATACTCCTCG