Insertion junction: CLIP2.006501_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.006501
Chromosome:chromosome 3
Location:3819082
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g169950 (1 of 1) PF02373//PF02375 - JmjC domain, hydroxylase (JmjC) // jmjN domain (JmjN) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGCACCGTCGAAAAGCTGACGCCCTGCTGCCAGCTGTAAGGCGCAACAG
Internal bar code:GCCTAGTGTGTACTCTGACGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1027
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:AATGCTAGGCCTGGTTGCTT
Suggested primer 2:CAAACACCACGAACCTGCTG