Insertion junction: CLIP2.006505_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.006505
Chromosome:chromosome 13
Location:3395365
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g586750 (1 of 239) IPR016024 - Armadillo-type fold outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGCCGGGGTGCTGCACAAGGATCAGTAAAAACAACCAGGCATCTGCGTA
Internal bar code:TGAATAAGCCCGCTCAGACCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3887
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:66
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:72

Suggested primers for confirmation by PCR

Suggested primer 1:ACCGTGTTCTGCTGTACCTG
Suggested primer 2:GCGGAATAGGGTTTGGGTCA