Insertion junction: CLIP2.006507_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.006507
Chromosome:chromosome 17
Location:3086825
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g720400 HMA1 (1 of 1) PTHR24093:SF272 - CADMIUM/ZINC-TRANSPORTING ATPASE HMA1, CHLOROPLASTIC-RELATED; heavy metal transporting ATPase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTCGGGCCATGGCTCGGTTGGACCCCTGAGCTCGGCCTCAGGCCGGCAT
Internal bar code:CTTTTCTATCCTCAACTCGGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1934
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:46
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:CTGGCCGTGAAGAACAGGAT
Suggested primer 2:AACCATGGTTCGCGATGACT