Insertion junction: CLIP2.006509_4

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.006509
Chromosome:chromosome 16
Location:7554801
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g683483 REX1-B,REX1B (1 of 1) PF14966 - DNA repair REX1-B (DNA_repr_REX1B); DNA repair protein and protein of unknown function CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAGGAGGCGGACATCGCGGCTTCCGGTGTTACAGTATGGTAGATGGGG
Internal bar code:TTGAGCACAGATCGGGTAACTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1040
LEAP-Seq percent confirming:60.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:GCAATCCTCCACGACACTCA
Suggested primer 2:ATTTCACTCCCGACAGGCTG