Insertion junction: CLIP2.006517_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.006517
Chromosome:chromosome 2
Location:4728967
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g108300 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCCTGAAGGAGGAGCTGTCAACACCTACGGGTTCGTTGAGCGCTGGTCC
Internal bar code:ACAGTCGATAGCGCCATGTGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1800
LEAP-Seq percent confirming:90.4762
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:TAAGGTCATCACGGCCCCTA
Suggested primer 2:AGGGGAAGGAGAAGGAGGAC