Insertion junction: CLIP2.006523_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.006523
Chromosome:chromosome 9
Location:6512876
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g415650 FAP351 Flagellar Associated Protein 351; (1 of 7) PF07004 - Sperm-tail PG-rich repeat (SHIPPO-rpt) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGTACAATCTTAGCCGTTGCACTGTTTGTCCCGTGTGCAGGGGCGATCC
Internal bar code:ACTTAGGGTTGTTATCACTTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1370
LEAP-Seq percent confirming:97.5
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:ATGCGCTGCTTGTTTTTCGT
Suggested primer 2:CTTCACAACTACAGCGCTGC