Insertion junction: CLIP2.006527_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.006527
Chromosome:chromosome 6
Location:5536600
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g286800 HBP1 Histone gene transcript 5' hairpin-binding protein; (1 of 1) K18710 - histone RNA hairpin-binding protein (SLBP) 3'UTR
Cre06.g286850 (1 of 1) 1.1.1.193 - 5-amino-6-(5-phosphoribosylamino)uracil reductase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTAAAAGGTGTGAAGCGGGTCCTCTCAAGTCCTCTCGCACTTCTTGCCTT
Internal bar code:ACGCGAAGGCGATAAATGTATG

Confirmation - LEAP-Seq

LEAP-Seq distance:2278
LEAP-Seq percent confirming:98.4127
LEAP-Seq n confirming:62
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:63

Suggested primers for confirmation by PCR

Suggested primer 1:AGGGCAATCCACGTGAGAAG
Suggested primer 2:ATGTGTGTCAAAGCCGTTGC