Insertion junction: CLIP2.006529_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.006529
Chromosome:chromosome 9
Location:1510571
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g399450 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGGGGAGTGGAGACCGAGCGGCACCAGCCGTGACAATTAGGGTTGTGCA
Internal bar code:GGTTTCGGAGTGGACATGCCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:378
LEAP-Seq percent confirming:9.52381
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:TCTGCCTTGGGTGTCGTAAC
Suggested primer 2:ATGACTCGGACGGCTTTGTT