Insertion junction: CLIP2.006536_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.006536
Chromosome:chromosome 3
Location:5064237
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g180000 intron
Cre03.g180017 outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGCCCGAAGTTGGCACCCGCACATCATTCCGCTTCCACGCACTTCCCCG
Internal bar code:GATGTATGATCTGAAAATCACG

Confirmation - LEAP-Seq

LEAP-Seq distance:1872
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GAAGCAGACTGTGGTGTCGA
Suggested primer 2:TGACCTACATGCGCACACAT