Insertion junction: CLIP2.006537_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.006537
Chromosome:chromosome 7
Location:5111221
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g348100 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGGAGCCCTGGGCTGGTTTTGGCTGCGAGCAATGGGCGCGCATGCAAG
Internal bar code:TGCTGCGCAAAATGGCGCGGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1679
LEAP-Seq percent confirming:22.2222
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:35
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:CACTCCAGCAAAGTAGCGGA
Suggested primer 2:GTAGTGCTTGTCCCACGTCA