Insertion junction: CLIP2.006542_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.006542
Chromosome:chromosome 1
Location:3559387
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g023200 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGTGAAGCCAAGGCGCAGGAAGGCGCGCTGGGCGTTGCAGGAGGTGGAG
Internal bar code:CCATCTGTGGGCTACCTTTGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:313
LEAP-Seq percent confirming:6.25
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:TCACTTGCCTGCCTCATCTG
Suggested primer 2:CATGGAGAAGGTGCAGCAGA