Insertion junction: CLIP2.006542_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.006542
Chromosome:chromosome 1
Location:3700175
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g024050 (1 of 26) IPR013026//IPR019734 - Tetratricopeptide repeat-containing domain // Tetratricopeptide repeat intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGTTGTTGGCGCTACGCACCTGCCGCGGTAGGTGCTGGTTCCTCCTAGC
Internal bar code:ATAGAATAGGCTAGCACCAAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:4102
LEAP-Seq percent confirming:70.8333
LEAP-Seq n confirming:51
LEAP-Seq n nonconfirming:21
LEAP-Seq n unique pos:72

Suggested primers for confirmation by PCR

Suggested primer 1:GGCCATTTCCTTCTCTGCCT
Suggested primer 2:CCGCCTTCTCGTAGTAGCTG