Insertion junction: CLIP2.006549_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.006549
Chromosome:chromosome 2
Location:4502250
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g106650 CDPK7 (1 of 6) PTHR24349//PTHR24349:SF23 - SERINE/THREONINE-PROTEIN KINASE // MAP KINASE-ACTIVATED PROTEIN KINASE 5; Calcium/calmodulin-dependent protein kinase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCCCCCTGGCCCAATCAACGCGAGCTGGCTGAGATGCCTGGCTGCGAT
Internal bar code:AAGGGTACAGGCGCCGGTGGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2923
LEAP-Seq percent confirming:71.0526
LEAP-Seq n confirming:54
LEAP-Seq n nonconfirming:22
LEAP-Seq n unique pos:76

Suggested primers for confirmation by PCR

Suggested primer 1:GTCCGAATCCTTTGCGATGC
Suggested primer 2:ACTTCACGGAACATGAGCGT