Insertion junction: CLIP2.006551_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.006551
Chromosome:chromosome 3
Location:5246760
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g182150 TEF8 (1 of 1) PTHR30373:SF2 - UPF0603 PROTEIN YGCG; Thylakoid Lumen Protein 18.3 outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGCCGCTGCTCCTCTCGTCCGCCGCCGTGCCGTGCAGATATGCTGCAAG
Internal bar code:AGAAGACGATCACGTAATTCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2473
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:119
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:119

Suggested primers for confirmation by PCR

Suggested primer 1:CGTCCCACGTGCTGATGATA
Suggested primer 2:CGGTGTGTGCCGTGAATTTT