Insertion junction: CLIP2.006552_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.006552
Chromosome:chromosome 2
Location:3676532
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g100150 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTCGCCGTGCACACACACCCTGGCTTACGTCGTAACGTCCCACACTCGC
Internal bar code:ATTTGGTGGGCAAGCCGGGGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1851
LEAP-Seq percent confirming:91.954
LEAP-Seq n confirming:80
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:87

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGTTTGACAAGCCCACTG
Suggested primer 2:TCCATTCGCGAGCCATAGTC