Insertion junction: CLIP2.006557_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.006557
Chromosome:chromosome 8
Location:2057994
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g369000 (1 of 6) PF09353 - Domain of unknown function (DUF1995) (DUF1995) 3'UTR
Cre08.g369050 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCAACAGGTTTGAGGTTTCATAAAACAGCAACTGAGCTCACGGCATGA
Internal bar code:GCCCGCGTGAATTAAAGCACTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1185
LEAP-Seq percent confirming:92.8571
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:AACGAAGTGTGCCGCTTTTC
Suggested primer 2:AAATGCACAGGCGAACAACC