Insertion junction: CLIP2.006562_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.006562
Chromosome:chromosome 16
Location:4759144
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre16.g687900 LHCA7 Light-harvesting protein of photosystem I; (1 of 3) K08911 - light-harvesting complex I chlorophyll a/b binding protein 5 (LHCA5) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGGTGAAGCCCAGGAACGAGCCGTCGGCCTGGCTGCCGGGGTTCTTGAA
Internal bar code:GATTCAGCTCTCTTTAAATTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:214
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GGCGCTATCTTTCAAGCAGC
Suggested primer 2:GACTAGCAGCCATCCGTACC