Insertion junction: CLIP2.006568_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.006568
Chromosome:chromosome 2
Location:1115956
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre02.g080700 BIP1 (1 of 2) K09490 - heat shock 70kDa protein 5 (HSPA5, BIP); Endoplasmic reticulum associated Hsp70 protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTGGATAGTGGCTCCCTCCACCTTACATCCTCCTGACAACGCGACTCCC
Internal bar code:GAGGTTAATCTCGGCTCAGATG

Confirmation - LEAP-Seq

LEAP-Seq distance:1405
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:34
LEAP-Seq n unique pos:51

Suggested primers for confirmation by PCR

Suggested primer 1:CGCCGGTAAGTAGCTAGTGG
Suggested primer 2:CGTAAGGCTAGGAGCTGAGC