Insertion junction: CLIP2.006571_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.006571
Chromosome:chromosome 8
Location:3166054
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g376450 CPLD36 Conserved in the Plant Lineage and Diatoms; (1 of 1) PF12159 - Protein of unknown function (DUF3593) (DUF3593) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGGTACTTCGTGTTGACCTGGCGATGCCCTGTAGGCGGCCGTCATGCGC
Internal bar code:ACGAAATTTAGTACATTTAAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1925
LEAP-Seq percent confirming:83.871
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:TTGTAAGGCGCGAATGAGGT
Suggested primer 2:GGGTATGTGGCGTTGGGTTA