Insertion junction: CLIP2.006578_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.006578
Chromosome:chromosome 10
Location:284155
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g419700 CGL6 (1 of 4) PF05653 - Magnesium transporter NIPA (Mg_trans_NIPA); Conserved in the Green Lineage intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCTTTAGATAGAAGTGCGAGAAGATGAGCAGAATCACGAGGCCCACCG
Internal bar code:AAGTAGGTAATAAGAACAGACT

Confirmation - LEAP-Seq

LEAP-Seq distance:6022
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:92
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:92

Suggested primers for confirmation by PCR

Suggested primer 1:GAACACGACGTGGAAGGACT
Suggested primer 2:TGTTAGCGGCAGGTAAGGTG