Insertion junction: CLIP2.006579_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.006579
Chromosome:chromosome 1
Location:7185651
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g051500 LUP1 Uncharacterized thykaloid lumenal polypeptide intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAGCAGTGGCGCGTCACCGCTAGTGATCTTCAAATCTCGACAACAGCAC
Internal bar code:TACAGGCAGGTGGCTCCTCAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2592
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:55
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:60

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTAGCTCTCCATCGAGGC
Suggested primer 2:CCAGCAATTCGTTCCGCAAA