Insertion junction: CLIP2.006582_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.006582
Chromosome:chromosome 3
Location:4948235
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g179200 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATATGACGGGTAGATGCTACCGGTATACACGCCCAAGACTTTATTCCCAT
Internal bar code:GTTTGATGAATTCCAGTATGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3753
LEAP-Seq percent confirming:88.4615
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:GGGGGCGTTAGAGCATAGTC
Suggested primer 2:ACGGAGTGAGTCATTCGTCG