Insertion junction: CLIP2.006584_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.006584
Chromosome:chromosome 8
Location:142775
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre08.g358538 (1 of 1) K06443 - lycopene beta-cyclase (lcyB, crtL1, crtY) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCATGGAAGAGGGTGCAATGGGCGGACGGACCATCACAGGGGGACAGAC
Internal bar code:TTCTCAGGTTAACAAGTGTACC

Confirmation - LEAP-Seq

LEAP-Seq distance:191
LEAP-Seq percent confirming:8.33333
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CACCTCCCTGCATCCCATTT
Suggested primer 2:GATGGTAGAGGGAGGGGGTT