Insertion junction: CLIP2.006587_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.006587
Chromosome:chromosome 1
Location:124598
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g000900 CPLD20 Conserved in the Plant Lineage and Diatoms; (1 of 2) PF07082 - Protein of unknown function (DUF1350) (DUF1350) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAAAAGAAAGAGAGCTCCCATCAAAGGCTGCGGGCACGGCCCTCCACCA
Internal bar code:GATGTTCGCCCTGACGTAGTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1236
LEAP-Seq percent confirming:97.2222
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:TAGGCAGGGAAGAGGGAGTC
Suggested primer 2:GACAGGACGGCAAGACAAGA