Insertion junction: CLIP2.006589_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.006589
Chromosome:chromosome 1
Location:4887672
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g034050 (1 of 1) PTHR11751:SF428 - PROTEIN NKAT-1-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGTGTTACGGTACGGTACTTGCCACCCCTCTCCTAGCACCCATTTGCAT
Internal bar code:CATCTAGGTTTTTGGGAGTAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:156
LEAP-Seq percent confirming:7.69231
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:ACACACACACACACACACCT
Suggested primer 2:TGTACGAGCACCTGGTGTTC