Insertion junction: CLIP2.006591_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.006591
Chromosome:chromosome 2
Location:510103
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g076600 Putative chloroplast localized Peptidyl-tRNA hydrolase; (1 of 1) K01056 - peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] (PTH1, pth, spoVC) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGGCGTTGCACCGGCTTGCAGTGTAGGCACGAGCCGAACTCCCCGCGC
Internal bar code:AAAGAGCAGGTCTTAGGACTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1775
LEAP-Seq percent confirming:91.4894
LEAP-Seq n confirming:43
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:AGTCCATACTAGGCCTGCCA
Suggested primer 2:GTATTGACTGCCGCAAGCTG