Insertion junction: CLIP2.006591_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.006591
Chromosome:chromosome 2
Location:510105
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g076600 Putative chloroplast localized Peptidyl-tRNA hydrolase; (1 of 1) K01056 - peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] (PTH1, pth, spoVC) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGCTGCCTTGGCAGTTGATATACGCATGCACAAGCAAACGCATCCGCA
Internal bar code:AAAGAGCAGGTCTTAGGACTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:918
LEAP-Seq percent confirming:93.3333
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:GTATTGACTGCCGCAAGCTG
Suggested primer 2:AGTCCATACTAGGCCTGCCA