Insertion junction: CLIP2.006596_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.006596
Chromosome:chromosome 13
Location:1284530
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g570900 MSRA1 (1 of 2) PTHR10173:SF6 - PEPTIDE METHIONINE SULFOXIDE REDUCTASE; Peptide methionine-S-sulfoxide reductase, msrA-type intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCTGACCCTTCCGTGCGGCCGTGCAGGAGGCTTCGTTCGCGAAGCTTCC
Internal bar code:AACGTTAGTCAGTAGTTCCGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3500
LEAP-Seq percent confirming:67.3077
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:52

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGGTCCTCGTACGAGATG
Suggested primer 2:GTATGGCGATCGGACTGAGG