Insertion junction: CLIP2.006599_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.006599
Chromosome:chromosome 17
Location:3391510
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g723250 CPP1,CPE1 chloroplast processing enzyme; (1 of 1) PTHR11851//PTHR11851:SF152 - METALLOPROTEASE // PROTEIN UCR-2.3 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGCAGCCGTTCGAGCCCTCCTACCTAGGAGCTCGTGAAAGCCGCTCCTC
Internal bar code:TGCGCTCCGGGCTTATCTAACG

Confirmation - LEAP-Seq

LEAP-Seq distance:2139
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:CCAGTTGTCGTTGGCAAAGG
Suggested primer 2:GTGCAACAGACCACACGAAC